it seems that in the GUI $FSLDIR is empty. Try including POSSUMDIR=$FSLDIR in your bash_profile (or where ever is the rest of your FSL env variables set up).
Ivana
On 18 Apr 2012, at 20:53, Ilia M wrote:
> Thanks for the quick reply,
>
> The *.o files are empty and the *.e files say:
>
> /bin/sh: /bin/possum: not found
>
> and
>
> /bin/sh: /bin/possumX_postproc.sh: not found
>
> It looks like possum is not being found by the GUI, even though I can see "possum" in $FSLDIR/bin
>
> Oh boy. Looks like a potential pathing problem? I wonder if my sys admin can help. :-(
>
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