I would start with FAST - FMRIB's Automated Segmentation Tool.
http://www.fmrib.ox.ac.uk/fsl/fast4/index.html
Dustin
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From: FSL - FMRIB's Software Library [[log in to unmask]] On Behalf Of Gelareh Ahmadi [[log in to unmask]]
Sent: Thursday, April 19, 2012 11:33 PM
To: [log in to unmask]
Subject: [FSL] Calculate Gray matter, White matter volume and BPF from VBM
Dear FSL expert,
I used VBM to analyse my data. I see that in many articles, gray matter (GM) and white matter (WM) and CSF volume has been calculated in the VBM but they did not mention how! Can anyone please let me know how I can do that?
Best Regards,
Gelareh
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