Hi Moran
The thickness calculations are always performed in subject space, not standard space.
Cheers
Bruce
On Feb 1, 2012, at 1:32 AM, Moran Artzi <[log in to unmask]> wrote:
> Dear Experts
> We are studying brains of subjects with substantial brain malformation.
> Is it possible to calculate cortical thickness in FreeSurfer without transferring the data into standard space?
> Otherwise Is there an alternative tool to study cortex thickness in the subject space?
>
> Thanks a lot
> Moran
>
>
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