Dear Sebastien,
I had the same error when I started to use aria2.3 one year ago. The
only way I found to solve the problem was to use cns1.1 instead of
cns1.3 or other cns versions.
However, if you find another solution to make it work, please share your
experience.
Lauriane
--
Lauriane Lecoq
phD student
Laboratoire de Resonance Magnetique Nucleaire
Institut de Biologie Structurale
41, rue Jules Horowitz
38027 Grenoble cedex 1
Tel : (33)-4-38-78-96-33
Email : [log in to unmask]
On 01/11/2012 03:27 PM, Brian Smith wrote:
> On Tue, 10 Jan 2012, Sebastian Eckert wrote:
>
>> When looking into one of the generated refine.out files from CNS, I
>> find the following errors:
>> " -------------------------- Torsion Topology
>> -----------------------------------
>> Please send a bug report to [log in to unmask]
>> Please increase the "maximum number of distinct bodies"
>> (torsion_maxtree) and re-run.
>> %TORSION:TOPOLOGY error encountered: Fatal Topology Error
>> (CNS is in mode: SET ABORT=NORMal END)
>> *****************************************************
>> ABORT mode will terminate program execution.
>> *****************************************************
>> Program will stop immediately."
>>
>> However, I can not find the parameter "torsion_maxtree" in the config
>> file and don't know where I could add it.
>
> I think this is in aria2.3/cns/protocols/torsiontop.cns and the
> parameter is the maxt one:
>
> dyna tors
> topology
> maxj 50
> kdihmax = 23.
> maxt 6
>
> try increasing maxt
>
> Dr. Brian O. Smith --------------------------- Brian Smith at glasgow
> ac uk
> Institute of Molecular, Cell and Systems Biology & School of Life
> Sciences,
> College of Medical, Veterinary & Life Sciences,
> Joseph Black Building, University of Glasgow, Glasgow G12 8QQ, UK.
> Tel: 0141 330 5167/6459/3089 Fax: 0141 330 4600
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