Hi all, I have problem when running bedpostx:
...
Making bedpostx directory structure
Queuing preprocessing stages
Queuing parallel processing stage
0 slices processed
Queuing post processing stage
Done!
That shows no slice processed and I got nothing in the output directory.
I use dicom2nii to convert the data;
do the BET successfully to get nodif_brain_mask.nii.gz;
ran Eddy current and get data.nii.gz;
ran DTIFIT with no problem;
however, when I ran bedpostx, 0 slices processed then done, without any error or crash...
In bedpostcom_log.tcl file, there is only one line:
bedpostx /home/dxdx/DICOM_data/fsldata/test1 -n 2 -w 1 -b 1000
Attached is data.ecclog
My system is intel core2due T8300, 4gb ram, Ubuntu 10.10, FSL4.1.4
Need help!
Thanks!
Qihang
|