Dear FSL-Experts,
I have a bunch of DTI-datasets of patients who have
undergone functional hemispherectomy. Since I want to run
voxelwise analyses, I need to normalize these highly
deformed brains.
I have tried to normalise the FA-maps to the MNI-template
using flirt/fnirt and masking out the lesions but the
results were not really convincing. Do you have any advice
on how the normalisation could be done best?
Any input on this is highly appreciated.
Thanks in advance!
Best,
Theodor
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