Dear Biomag Community,
We need your help! We have established a web-portal (it
has been updated) for distributing realistic simulated
data, as well as empirical data, for the sole purpose of
providing the MEG community with common datasets with
which groups can test their MEG algorithms
(http://cobre.mrn.org/megsim/). Many of you have helped us
before (2007) by sending us letters/email indicating a
need for such an MEG portal which we sent along with our
R21 NIH grant application (a small exploratory grant good
for 2 years). We eventually received the grant and now we
wish to turn it into a larger grant funded by NIH,
expanding our simulations to include EEG. The reviewer
comments from the first submission centered on the
question of whether anyone would use the simulated
datasets generated. A secondary concern was that our
simulated data sets were out of date. I am hoping that we
can open communication channels between our MEG/EEG
community members and discuss what is needed most by the
community so that we can deliver something that most
members would be happy to use.
I am enclosing our “in press” article outlining the
web-portal which shows examples of many of the datasets
and first pass results for immediate benchmark
comparisons. This article was intended to mark the
official opening of our web portal.
Based on the reviewers concerns, we have some specific
brief questions we hope you will take a couple of minutes
to answer:
1. Is there a community need for these shared datasets?
2. Is it helpful to have basic sensory simulations
(visual, auditory, somatosensory), in addition to more
complex simulations? These datasets represent easier cases
to analyze in most situations.
3. Is it helpful to construct realistic simulated data
reflecting functional connectivity which would include
unique single-trials and continuous data?
3. Is it useful to have overall analyses conducted on the
outcome of different algorithms so we can directly compare
performance across algorithms?
4. Is it useful to construct a large empirical cognitive
dataset (n=25), emphasizing functional connectivity, that
includes DTI, neuropsychological test measures, task
performance measures, to share with the community (for
exploratory connectivity analyses)?
5. Should we develop an external committee to help set
guidelines for the creation of datasets and maintenance of
the web-portal?
6. If a simulation for your project was available, would
you use it rather than generating your own simulations
(assuming that the data format was compatible with your
software?
7. What other needs do you envision for the success of a
community web-portal containing simulated and empirical
datasets?
We are planning on submitting a revised grant application
around Dec 1 2011. If you would like to help us please
send a letter to me at the address below (or attach a
letter to email—one reviewer didn’t appreciate 1- or 2-
line sentences sent via email). I am sending this to the
Biomag list. If there are others who should receive it,
but are not on the Biomag list, please forward this
message to them. Thank you!
Sincerely,
Cheryl J. Aine, PhD
Professor, Department of Radiology
MSC10 5530
1 University of New Mexico
Albuquerque, NM 87131
505 272-5557
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