Hello,
I think if you do a second update you should be ok (but let me know if
not!). So the problem was that the code for the update itself has
changed, and without that patch some of the remaining patches would fail.
(I sent a couple of emails out about this N months ago but I guess you
were not on the mailing list at the time.) If you cannot start up
Analysis then just run
/home/kati/bin/ccpnmr/bin/updateAll
to get all the other updates.
Wayne
On Mon, 3 Oct 2011, Katalin Kover wrote:
> Dear All,
>
> I am runnnig Analysis 2.1.5, but I did not use it for quite some time. I tried to do an update now, but I got the following error messages:
>
>
>>>> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/general/Io.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/WindowDraw.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditExperimentSeries.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/AnalysisPopup.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/util/NmrCalc.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/utrecht/haddock/HaddockPopup.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/paris/aria/AriaExtendNmrFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/gui/ViewStructureFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditCalculation.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/PeakBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/LinkSeqSpinSystems.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/StructureBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditAssignment.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditProfiles.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/WindowFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledWindow.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/Analysis.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/frames/PeakTableFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/ChemicalShiftBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/cambridge/bayes/PeakSeparator.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/cambridge/bayes/PeakSeparatorGui.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/WindowBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/cambridge/dangle/src/Protein.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/cambridge/dangle/src/Reference.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledGraph.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/CreateAxisType.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/LinkNoeResonances.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/CalcShiftDifference.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/Citation.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/FollowShiftChanges.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/ViewChemicalShifts.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/NewWindow.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/AssignmentBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/gui/QueryDialogBox.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/spectra/params/ExternalParams.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/NmrPipePseudo.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/editor/ApplicationTemplate.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/editor/PopupTemplate.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/BrowseResonances.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/macros/OpenProjectionSpectra.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/gothenburg/prodecomp/ProdecompFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/gothenburg/prodecomp/prodecomp.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/spectra/params/FactorisedParams.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/WindowPopup.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/gothenburg/prodecomp/CcpnProdecomp.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/gothenburg/prodecomp/generateInterval.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/gothenburg/prodecomp/PeaksToInterval.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/gui/BasePopup.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/bruker/processingParsIO.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/general/Io.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/TranslatePeak.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/wrappers/Mars.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/DataAnalysisBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/ViewAssignment.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/general/SelectObject.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/MoleculeBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/Util.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/gui/ViewChemCompVarFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditSpectrum.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/gui/ScrolledMatrix.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditExperiment.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditMolecules.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/converters/DataFormat.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/update/UpdateAgent.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditPeakLists.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/spectra/params/NmrPipeData.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/eci/EntryCompletionFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/AssignmentAdvanced.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/LinkPeakLists.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/general/Constants.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/ViewQualityReports.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/nexus/AutoBackboneNexus.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/nexus/AutoBackbonePopup.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/nexus/NexusBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/ExperimentBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/extendNmr/ExtendNmrGui.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/converters/NmrStarFormat.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/talos/dihedralConstraintsIO.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/talos/generalIO.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/talos/projectIO.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/talos/sequenceIO.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/gui/FileSelect.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/cambridge/dangle/DangleGui.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/PrintWindow.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/CalcDistConstraints.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/gui/PeakDimSelectPopup.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/general/Conversion.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/converters/AnsigFormat.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/util/Molecule.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/format/gui/DataShifter.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccp/format/spectra/params/BrukerParams.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/data/ccp/molecule/ChemComp/other+Nh3+ChemBuild_tjs23_2011-03-14-23-20-04-832_00001.xml
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/data/ccp/molecule/ChemComp/other+Acy+ChemBuild_tjs23_2011-03-14-23-20-23-515_00001.xml
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/SecStructureGraph.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/CopyAssignments.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/CalcRates.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/paris/aria/AriaRunFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/data/ccp/nmr/NmrExpPrototype/225+ccpn_rhf22_2009-04-17-12-12-44-192_00001.xml
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/SpinSystemTyping.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/OpenSpectrum.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/core/ConstraintBasic.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/analysis/popups/EditPeakFindParams.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/cambridge/dangle/DangleFrame.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/metamodel/MetaModel.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/general/Version.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/format/compatibility/part1/Converters1.py
> installing /home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/format/compatibility/downgrade/v_2_1_0/General.py
> Exception in Tkinter callback
> Traceback (most recent call last):
> File "/home/kati/bin/ccpnmr/python2.6/lib/python2.6/lib-tk/Tkinter.py", line 1410, in __call__
> return self.func(*args)
> File "/home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/update/UpdatePopup.py", line 182, in install
> self.installUpdates()
> File "/home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/update/UpdateAgent.py", line 194, in installUpdates
> update.setInstallFromCache()
> File "/home/kati/bin/ccpnmr/ccpnmr2.1/python/ccpnmr/update/UpdateAgent.py", line 571, in setInstallFromCache
> except Exception, e:
> File "/home/kati/bin/ccpnmr/python2.6/lib/python2.6/py_compile.py", line 115, in compile
> f = open(file, 'U')
> IOError: [Errno 2] No such file or directory: '/home/kati/bin/ccpnmr/ccpnmr2.1/python/memops/format/compatibility/downgrade/v_2_1_0/General.py'
>
> What do I do wrong? Do I have to reinstall a new verison?
>
> Thanks a lot for any help!
> Katalin Kover
>
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