Can you send the command script, and mapdump output for any input maps?
Also, if you are entering a PDB file, the cell, spacegroup, and an idea
of range of X, Y, and Z values?
On 09/06/2011 09:56 AM, Ingo P. Korndoerfer wrote:
> hello,
>
> it seems i am recently getting the above error quite a lot in mapmask. i
> have searched for a solution, but only found the problem mentioned a
> few times with no precise solution indicated.
>
> would there be a way to find out HOW MUCH memory mapmask is hoping for ?
>
> i do have 2 Gb of memory and 3 Gb of swap, and "limit" says
>
> cputime unlimited
> filesize unlimited
> datasize unlimited
> stacksize 8192 kbytes
> coredumpsize 0 kbytes
> memoryuse unlimited
> vmemoryuse unlimited
> descriptors 1024
> memorylocked 64 kbytes
> maxproc unlimited
>
> mapmask itself dies in the middle of running and without error message
> to its log file.
>
> thanks
>
> ingo
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