This has been reported and I thought fixed??
Eleanor
On Mon, 8 Aug 2011 16:01:27 +0100, Charles Ballard
<[log in to unmask]> wrote:
> Hi Chris
>
> In Stephen's case the problem was that the column names were too long.
> They are limited to 30 characters by the mtz "standard"
>
> running through it looks like the problem is name truncation on the
output
> columns. Whether it is the
> total name, /crystal/dataset/column , or just the column name I do not
> know. If I reduce the length of
> colout it runs through successfully
> Charles Ballard
> CCP4
>
> On 8 Aug 2011, at 15:27, Chris Richardson wrote:
>
>> Dear all,
>>
>> We have a problem where cTruncate generates an error message when
trying
>> to process data from Scala as part of a "Scale and Merge Intensities"
>> task in the GUI. Scala appears to run ok. cTruncate produces
>>
>>>
***************************************************************************
>>> * Information from CCP4Interface script
>>>
***************************************************************************
>>> The program run with command: /sw/share/xtal/ccp4-6.2.0/bin/ctruncate
>>> -hklin "/tmp/foop/Scala_1_1_mtz.tmp" -hklout
>>> "/tmp/foop/Scala_1_3_mtz_MPS1-1624-118.tmp" -colin
>>> "/*/*/\[IMEAN,SIGIMEAN\]" -colano "/*/*/\[I(+),SIGI(+),I(-),SIGI(-)\]"
>>> -colout MPS1-1624-118
>>> has failed with error message
>>> CCP4MTZfile - internal error
>>> terminate called after throwing an instance of
'clipper::Message_fatal'
>>>
***************************************************************************
>>>
>>> #CCP4I TERMINATION STATUS 0 "CCP4MTZfile - internal error terminate
>>> called after throwing an instance of 'clipper::Message_fatal'"
>>
>> We're running CCP4 6.2.0 compiled by 32-bit fink on OS X 10.6.8. The
>> GUI task runs to completion with other input MTZ files that I have
tried.
>> If I run the ctruncate command in a shell, it generates the same error.
>>
>> Dr Stephen Carr posted a similar query back in March 2011, but didn't
>> get any replies on the bb. Does anyone know what's going on here?
>>
>> Regards,
>>
>> Chris
>> --
>> Dr Chris Richardson :: Sysadmin, structural biology, icr.ac.uk
>>
>>
>> The Institute of Cancer Research: Royal Cancer Hospital, a charitable
>> Company Limited by Guarantee, Registered in England under Company No.
>> 534147 with its Registered Office at 123 Old Brompton Road, London SW7
>> 3RP.
>>
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