Dear Mark,
thanks for your quick reply. Maybe I was not clear enough: I already ran surface_fdr and loaded the corresponding *Fthresh.vtk file in FSLView (showing that most effects survive correction). Now I would like to "illustrate" the p-values (as in Fig. 8b of the Patenaude paper). Sorry, but I was not able to find any information on how to do this in the course, FSLView or FIRST documentation.
Thanks again
Philipp
-------- Original-Nachricht --------
> Datum: Wed, 6 Jul 2011 15:20:42 +0100
> Von: Mark Jenkinson <[log in to unmask]>
> An: [log in to unmask]
> Betreff: Re: [FSL] FSL-FIRST vertex analysis: converting F into p-value
> Dear Philipp,
>
> The 3D view in FSLView will do this.
> You need to run surface_fdr to get corrected statistics and then
> just follow the directions for display in the practical session from
> the FSL course.
>
> All the best,
> Mark
>
> On 6 Jul 2011, at 14:58, philipp thomann wrote:
>
> > Dear FSL experts,
> >
> > is there any FSLview driven way to show the color-coded p-values of a
> given analysis (e.g. group comparison or correlation) or do you have to use
> fslmaths for this purpose? If so, how? I'd like to illustrate my results as
> shown in the Patenaude paper (Neuroimage 2011).
> >
> > Any advice is highly appreciated
> >
> > Philipp
> >
> >
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