Hi,
I'm afraid applywarp will only take one matrix at a time.
The tool applyxfm4D would take a set of matrix files, but
unfortunately does not yet support spline interpolation.
We will be putting spline interpolation into these tools in
the future though, but at the moment you need to do
fslsplit, loop applywarp, then fslmerge.
All the best,
Mark
On 14 Jun 2011, at 17:39, Satrajit Ghosh wrote:
> hi
>
> if i run mcflirt on a 4d time series and generate the list of mat files for the transforms. can i then send the single 4d mat file and the list of transforms to applywarp (in order to use spline interpolation)? or will i need to split the 4d file into 3d files, apply the transforms individually and then merge them back in?
>
> cheers,
>
> satra
>
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