I have just started using extendNmr under Ubuntu 10.4 LTS. For the first time, Analysis and Aria seemed to work fine, but later, I started to see a few problems.
1.M:Structure:Make shift restraints window does not work. There is an error something like this -
Reading: <open file '/home/venki/Soft/extendNmr/bin/defaultProject_ccpnGridRun/ccp/nmr/NmrConstraint/2+defaultProject_ccpnGridRun_venki_2011-05-31-02-38-08-362_00001.xml', mode 'r' at 0x13531c60>
Last xml tag read: NMRC.NmrConstraintStore.structureGenerations
Parser state was: reading
Current object was: <ccp.nmr.NmrConstraint.NmrConstraintStore [2]>
Exception in Tkinter callback
Traceback (most recent call last):
File "/scratch/ccpn/extendNmr/other2/python2.5/lib/python2.5/lib-tk/Tkinter.py", line 1414, in __call__
return self.func(*args)
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccpnmr/analysis/popups/BrowseConstraints.py", line 1483, in splitRestraintListAmbig
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccpnmr/analysis/core/ConstraintBasic.py", line 1056, in splitConstraintListAmbigUnambig
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccp/api/nmr/NmrConstraint.py", line 31815, in __init__
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccpnmr/analysis/popups/EditCalculation.py", line 990, in updateConstraintLists
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccpnmr/analysis/popups/EditCalculation.py", line 975, in getConstraintLists
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccp/api/nmr/Nmr.py", line 45421, in sortedNmrConstraintStores
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/memops/api/Implementation.py", line 16980, in refreshTopObjects
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/memops/format/xml/XmlIO.py", line 251, in loadFromFile
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/memops/format/xml/XmlIO.py", line 267, in loadFromStream
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/memops/xml/Implementation.py", line 4931, in loadFromStream
File "/scratch/ccpn/extendNmr/extend_nmr/ccpn/python/ccp/api/nmr/NmrConstraint.py", line 21889, in setStructureGenerations
ApiError: ccp.nmr.NmrConstraint.NmrConstraintStore.setStructureGenerations:
value is not of class ccp.nmr.Nmr.StructureGeneration: None
Error loading file for: <ccp.nmr.NmrConstraint.NmrConstraintStore [2]>
Reading: <open file '/home/venki/Soft/extendNmr/bin/defaultProject_ccpnGridRun/ccp/nmr/NmrConstraint/2+defaultProject_ccpnGridRun_venki_2011-05-31-02-38-08-362_00001.xml', mode 'r' at 0x1ba17648>
Last xml tag read: NMRC.NmrConstraintStore.structureGenerations
Parser state was: reading
Current object was: <ccp.nmr.NmrConstraint.NmrConstraintStore [2]>
2. ExtendNmr refuses to "Save As" projects.
There is a popup with the message -
ccp.nmr.NmrConstraint.NmrConstraintStore.setStructureGenerations:
value is not of class
ccp.nmr.Nmr.StructureGeneration:None
Has any one found these errors. Would be great if someone could throw some light on this.
With best regards
Venkatesh Ramakrishnan.
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