HI,
sorry to trouble you but I'm having a rather weird issue with the higher-level stage - this always worked fine
in other analyses with different datasets but in the current one the higher-level stage
just freezes at the initial stage of the higher-level input files preparation- I left it all night running
and currently is running fslmaths using 1% of the processor which suggest to me this is frozen....
Any help or suggestios would be appreaciated? I checked the output of the first level analyses and seemed fine
below is the log report- no errors apparent?
thanks, david
LOG REPORT
Feat main script
/bin/cp /tmp/feat_TbMVXZ.fsf design.fsf
/usr/local/fsl/bin/feat_model design
mkdir .files;cp /usr/local/fsl/doc/fsl.css .files;ln -s /usr/local/fsl/doc/images .files/images
/usr/local/fsl/bin/fsl_sub -T 60 -l logs -N feat2_pre /usr/local/fsl/bin/feat /Users/dsoto/Documents/fMRI/novelty/l2sm7+.gfeat/design.fsf -D /Users/dsoto/Documents/fMRI/novelty/l2sm7+.gfeat -gfeatprep
Higher-level input files preparation
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj1/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj2/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj3/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj4/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj5/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj6/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj7/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj8/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj9/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj10/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj11/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj12/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj13/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj14/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj15/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj16/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj17/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj18/afmri_noveldata.feat
/usr/local/fsl/bin/featregapply /Users/dsoto/Documents/fMRI/novelty/subj19/afmri_noveldata.feat
/usr/local/fsl/bin/fslmerge -t bg_image /Users/dsoto/Documents/fMRI/novelty/subj1/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj2/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj3/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj4/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj5/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj6/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj7/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj8/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj9/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj10/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj11/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj12/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj13/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj14/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj15/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj16/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj17/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj18/afmri_noveldata.feat/reg_standard/reg/highres /Users/dsoto/Documents/fMRI/novelty/subj19/afmri_noveldata.feat/reg_standard/reg/highres
/usr/local/fsl/bin/fslmaths bg_image -inm 1000 -Tmean bg_image -odt float
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