Hi Christian,
Thanks for the link. I actually already tried those. The current IRTK package for 64-bit Linux does contain areg, jacobian, nreg, and transformation, but unfortunately is missing dof2gipl and transformation2. Also, the files that are included have some library dependency issues, probably because the cluster I'm working on isn't running Ubuntu Linux. Anyway, thanks for the thought!
Any other ideas? I'm recompiling 4.0.0 now and will drop in the IRTK binaries from 4.0.2 again, just in case I made a mistake before...
Sara
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