On Thu, 21 Apr 2011, Tim Jenness wrote:
> On Apr 18, 2011, at 2:46 PM, Luca Rizzi wrote:
>
> >
> > [exec] rm -r -f temp
> > [exec] Undefined symbols:
> > [exec] "_astGBBuf", referenced from:
> > [exec] _BBuf in libast_la-plot.o
> > [exec] "_astGEBuf", referenced from:
> > [exec] _EBuf in libast_la-plot.o
> > [exec] ld: symbol(s) not found
> > [exec] collect2: ld returned 1 exit status
> >
>
> Should be fixed in revision 9860. I just updated the ast_link command so that it understand grf5.6. This does not add support for grf5.6 into JNIAST but it fixes the build to use the fallbacks.
ant build-native in jniast now does not work for me:
andromeda % pwd
/data/andromeda1/starjava/source/jniast
andromeda % svnversion .
9861
andromeda % /usr/java/jdk1.5.0_22/bin/java -version
java version "1.5.0_22"
Java(TM) 2 Runtime Environment, Standard Edition (build 1.5.0_22-b03)
Java HotSpot(TM) 64-Bit Server VM (build 1.5.0_22-b03, mixed mode)
andromeda % ant build-native
/usr/java/jdk1.5.0_22
Buildfile: build.xml
prepare:
build_classes:
[mkdir] Created dir: /data/andromeda1/starjava/source/jniast/build/classes
[javac] Compiling 76 source files to /data/andromeda1/starjava/source/jniast/build/classes
assemble_jni:
[copy] Copying 65 files to /data/andromeda1/starjava/source/jniast/build/jni
[javah] [Search path = /usr/java/jdk1.5.0_22/jre/lib/rt.jar:/usr/java/jdk1.5.0_22/jre/lib/i18n.jar:/usr/java/jdk1.5.0_22/jre/lib/sunrsasign.jar:/usr/java/jdk1.5.0_22/jre/lib/jsse.jar:/usr/java/jdk1.5.0_22/jre/lib/jce.jar:/usr/java/jdk1.5.0_22/jre/lib/charsets.jar:/usr/java/jdk1.5.0_22/jre/classes:/data/andromeda1/starjava/source/jniast/build/classes]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/AstException.class]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/RuntimeException.class)]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/Exception.class)]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/Throwable.class)]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/Object.class)]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_AstException.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/AstObject.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_AstObject.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Box.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Region.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Frame.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Mapping.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Box.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Channel.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/KeyMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Channel.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Circle.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Circle.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/CmpFrame.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_CmpFrame.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/CmpMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_CmpMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/CmpRegion.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_CmpRegion.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/DSBSpecFrame.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SpecFrame.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_DSBSpecFrame.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Ellipse.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Ellipse.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/FitsChan.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_FitsChan.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/FluxFrame.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_FluxFrame.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/FrameSet.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Frame.h]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_FrameSet.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/GrismMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_GrismMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Interval.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Interval.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/IntraMap.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Transformer.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_IntraMap.h]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/Double.class)]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/Number.class)]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/lang/Integer.class)]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_KeyMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/LutMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_LutMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Mapping$Interpolator.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/ResampleFlags.class]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Mapping$Spreader.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Mapping.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/MathMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_MathMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/MatrixMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_MatrixMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/NullRegion.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_NullRegion.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/PcdMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_PcdMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/PermMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_PermMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Plot.class]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/awt/geom/Rectangle2D.class)]
[javah] [Loaded /usr/java/jdk1.5.0_22/jre/lib/rt.jar(java/awt/geom/RectangularShape.class)]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Plot.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Polygon.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Polygon.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/PolyMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_PolyMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/PointList.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_PointList.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Prism.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Prism.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/RateMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_RateMap.h]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Region.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SelectorMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SelectorMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/ShiftMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_ShiftMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SkyFrame.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SkyFrame.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SlaMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SlaMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SpecFluxFrame.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SpecFluxFrame.h]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SpecFrame.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SpecMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SpecMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SphMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SphMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/Stc.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_Stc.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/StcCatalogEntryLocation.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_StcCatalogEntryLocation.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/StcObsDataLocation.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_StcObsDataLocation.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/StcResourceProfile.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_StcResourceProfile.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/StcSearchLocation.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_StcSearchLocation.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/SwitchMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_SwitchMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/TimeFrame.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_TimeFrame.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/TimeMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_TimeMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/TranMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_TranMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/UnitMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_UnitMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/WcsMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_WcsMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/WinMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_WinMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/ZoomMap.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_ZoomMap.h]
[javah] [Loaded /data/andromeda1/starjava/source/jniast/build/classes/uk/ac/starlink/ast/grf/GrfEscape.class]
[javah] [Creating file /data/andromeda1/starjava/source/jniast/build/jni/uk_ac_starlink_ast_grf_GrfEscape.h]
build-native:
[unjar] Expanding: /data/andromeda1/starjava/source/jniast/src/lib/amd64/jniast_libs.jar into /data/andromeda1/starjava/source/jniast/build/lib/amd64
execute_mk_script:
[echo] java.home=/usr/java/jdk1.5.0_22/jre
[exec] mk: Environment variables defined for ix86_Linux system
[exec] make -e shared
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c jniast.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c err_jniast.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c AstException.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c AstObject.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Box.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Channel.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Circle.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c CmpFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c CmpMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c CmpRegion.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c DSBSpecFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Ellipse.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c FitsChan.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c FluxFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Frame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c FrameSet.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c GrismMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Interval.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c IntraMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c KeyMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c LutMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Mapping.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c MathMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c MatrixMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c NullRegion.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c PcdMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c PermMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Plot.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c PointList.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Polygon.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c PolyMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Prism.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c RateMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Region.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SelectorMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SkyFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SlaMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c ShiftMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SpecFluxFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SpecFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SpecMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SphMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c Stc.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c StcCatalogEntryLocation.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c StcObsDataLocation.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c StcResourceProfile.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c StcSearchLocation.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c SwitchMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c TimeFrame.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c TimeMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c TranMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c UnitMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c WcsMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c WinMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c ZoomMap.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c GrfEscape.c
[exec] gcc -I. -I/include -I/usr/java/jdk1.5.0_22/jre/../include -I/usr/java/jdk1.5.0_22/jre/../include/linux -I/mbt/local/star-kaulia/include -g -fPIC -c bdpthread.c
[exec] mkdir temp
[exec] (files=`./jniast_libraries`; \
[exec] cd temp; \
[exec] for f in $files ""; do \
[exec] echo "Processing $f"; \
[exec] if test -n "$f"; then \
[exec] ar x $f; \
[exec] fi;\
[exec] done)
[exec] Processing /mbt/local/star-kaulia/lib/libast.a
[exec] Processing /mbt/local/star-kaulia/lib/libast_wcslib.a
[exec] Processing /mbt/local/star-kaulia/lib/libast_pal.a
[exec] Processing /mbt/local/star-kaulia/lib/libast_grf_5.6.a
[exec] Processing /mbt/local/star-kaulia/lib/libast_grf3d.a
[exec] Processing /mbt/local/star-kaulia/lib/libast_pass2.a
[exec] Processing
[exec] f() { gcc -shared -o $1 $2 -lm -lgcc -lc -lpthread;}; f /data/andromeda1/starjava/source/jniast/build/lib/amd64/libjniast.so 'jniast.o err_jniast.o AstException.o AstObject.o Box.o Channel.o Circle.o CmpFrame.o CmpMap.o CmpRegion.o DSBSpecFrame.o Ellipse.o FitsChan.o FluxFrame.o Frame.o FrameSet.o GrismMap.o Interval.o IntraMap.o KeyMap.o LutMap.o Mapping.o MathMap.o MatrixMap.o NullRegion.o PcdMap.o PermMap.o Plot.o PointList.o Polygon.o PolyMap.o Prism.o RateMap.o Region.o SelectorMap.o SkyFrame.o SlaMap.o ShiftMap.o SpecFluxFrame.o SpecFrame.o SpecMap.o SphMap.o Stc.o StcCatalogEntryLocation.o StcObsDataLocation.o StcResourceProfile.o StcSearchLocation.o SwitchMap.o TimeFrame.o TimeMap.o TranMap.o UnitMap.o WcsMap.o WinMap.o ZoomMap.o GrfEscape.o bdpthread.o temp/*.o' '';\
[exec] rm -r -f temp
[exec] /usr/bin/ld: temp/grf_5.6.o: relocation R_X86_64_32 against `a local symbol' can not be used when making a shared object; recompile with -fPIC
[exec] temp/grf_5.6.o: could not read symbols: Bad value
[exec] collect2: ld returned 1 exit status
[jar] Building jar: /data/andromeda1/starjava/source/jniast/src/lib/amd64/jniast_libs.jar
--
Mark Taylor Astronomical Programmer Physics, Bristol University, UK
[log in to unmask] +44-117-928-8776 http://www.star.bris.ac.uk/~mbt/
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