Hi,
On Wed, 2011-04-06 at 14:14 -0700, William G. Scott wrote:
> On Apr 6, 2011, at 12:50 PM, Krystle Williams wrote:
>
> > Hi,
> > I had installed Coot v. 0.6-pre-1 successfully using fink a couple years ago on an Intel iMac running OSX 10.5.8. Last week I tried to update it with fink. When that failed, I ended up downloading a new build from http://sage.ucsc.edu/~wgscott/xtal/wiki/index.php/Stand-Alone_Coot, failing to notice the 10.6 in the label and installed it.
>
> Sorry, but I don't have an intel machine running 10.5 (and my ppc is about to die).
>
> > After I realized this I removed that version, found the correct (previous version I had installed) version on the site and reinstalled.
> >
> > Problem is when I type coot into X11 terminal I get this error:
> >
> > dyld: unknown required load command 0x80000022
> > /Libary/Coot/bin/coot: line 6: 39888 TRace/BPT trap /Library/Coot/bin/coot-real "$@"
This is the error you normally get when running a binary on a 10.5
system that was built on a 10.6 system. (It can in principle be avoided
by setting the environment variable MACOSX_DEPLOYMENT_TARGET=10.5 at
build time, but for an application like Coot with a very complex build
procedure I guess that there is a possibility that this won't work.)
>
> My guess is your path is pointing to /usr/local/bin/coot. Delete that script if you haven't already, or just issue
>
> /sw/bin/coot
This may well help, but the fact that you are getting this error shows
that your attempt to remove the 10.6 version of Coot that you installed
by mistake was not completely successful. You can double-check for this
by doing:
otool -l /Library/Coot/bin/coot-real
If the output contains:
Load command 4
cmd ?(0x80000022) Unknown load command
(maybe with a different number after "Load command"), you definitely
have a 10.6-only binary.
The corresponding output on a 10.6 system would look like this:
Load command 4
cmd LC_DYLD_INFO_ONLY
Maybe others on this list can advise on how to do a complete uninstall
of the 10.6-only version.
Regards,
Peter.
>
> >
> > Coot opens fine through Phenix, I just can't seem to open it independently anymore.
> >
> > Any suggestions for fixing this?
> >
> > Thanks,
> > Krystle
--
Peter Keller Tel.: +44 (0)1223 353033
Global Phasing Ltd., Fax.: +44 (0)1223 366889
Sheraton House,
Castle Park,
Cambridge CB3 0AX
United Kingdom
|