You might be looking at the wrong output file. Take a look at the report.txt file, which prints out the summary stats for the ROI that you've interrogated (i.e., the numbers in the report.html file). You can extract the relevant number (I usually go with the median in case anything is biased by outliers) for each subject with a shell script or matlab. The shell script example is described at the bottom of this page (http://www.fmrib.ox.ac.uk/fsl/feat5/featquery.html).
Cheers,
David
On Mar 9, 2011, at 2:56 PM, Jodi Gilman wrote:
> Hm... I already have -p in my script, and still get those lists of numbers. I guess I can do it through Excel. In a block design, would you recommend using my 'rest' blocks as baseline? Or, only the first rest block as baseline?
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