Hi Mark, thanks for your response.
1/ ResamplingImage-exe is no fsl, but I use flirt with applyxfm and -init option then.
2/ when I speak about MRI's signal intensity in Hz, I refer about Pmod pocessed image (scuse me I have not added this)
3/ I send you some examples ( http://dl.free.fr/nRHjRegJd) of images with registration's problems : fusion between MRI and CT with flirt . And you can see my problem: all is opposite and sagittal instead of axial etc ...
all my best
marie
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