Hi
Can you type the following commands (from the bedpostX output directory) and send us the output:
ls -lrt diff_slices
ls -lrt logs
Cheers,
Saad
On 31 Jan 2011, at 17:24, Sarael Alcauter wrote:
> Hi,
>
> I've tried to run bedpostx in a set of 128 dwi acquired in 4 sets of 32 dwis and concatenated using fslmerge, bvals and bvecs were concatenated accordingly.
>
> When running bedpostx, I get the next message (including the command, to let you know how I did it):
>
> $ date;bedpostx b2000_pBedpostx>>output_bedpostx;date
> Tue Jan 25 11:48:43 CST 2011
> /usr/local/fsl/bin/bedpostx: line 287: 14560 User defined signal 1 ${subjdir}.bedpostX/monitor
> [1]+ Done fsl
> Thu Jan 27 12:40:59 CST 2011
>
> When I go to the output directory, I just have the next files:
>
> diff_slices (directory)
> logs (directory)
> xfms (directory)
> bvals
> bvecs
> commands.txt
> mean_dsamples.nii.gz
> monitor
> nodif_brain_mask.nii.gz
>
> I tried again running from the gui, but I get the same results. I've searched in the posts but found no similar posts. Any help is appreciated.
>
> Thanks
>
> Sarael Alcauter
> Instituto Nacional de Psiquiatría Ramón de la Fuente.
> México, D.F., México
>
--
Saad Jbabdi
University of Oxford, FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
(+44)1865-222466 (fax 717)
www.fmrib.ox.ac.uk/~saad
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