At 00:15 10-01-2011, Bernhard Rupp (Hofkristallrat a.D.) wrote:
>Yes, exactly. 2002 papers, the question is how to
>1) assure consistent deposition verification
>2) how to fix omissions in earlier entries
>
>Best, BR
>
>PS: How did the EO confirm deposition - just ask you or the PDB, or some
>more automated mechanism?
I don't know exactly. I sent them a copy of the release confirmation
from PDB at EBI. I assume they did a direct check on the web, based
on the entry IDs I sent them.
>-----Original Message-----
>From: [log in to unmask] [mailto:[log in to unmask]]
>Sent: Sunday, January 09, 2011 3:35 PM
>To: [log in to unmask]
>Cc: [log in to unmask]
>Subject: Re: [ccp4bb] deposited SF (or not)?
>
>Hi, Bernhard,
>
>I recently published a paper in JBC that was published online only after
>the Editorial Office confirmed release of PDB coordinates and structure
>factors. Maybe those structures you mention are older and their internal
>checking procedures were not yet fully developed ?
>
>Cheers,
>
>Pedro.
>
> > Dear All,
> >
> > during a random search for a model structure I found a situation where the
> > journal article clearly states that coordinates and SFs were deposited for
> > a
> > series of structures. EDS and SF files were absent and I confirmed with
> > PDB
> > that no SFs were ever deposited.
> >
> > I have no feeling for how frequent this is nor do I suggest anything more
> > than book-keeping errors. Nevertheless I wonder if there is a way to
> > crosscheck this in an automatic fashion (maybe PDB has some tools to do
> > that?) or whose responsibility it is to ensure consistency here. JBC
> > editors
> > have not responded so far.
> >
> > Best, BR
> > -----------------------------------------------------------------
> > Bernhard Rupp
> > 001 (925) 209-7429
> > +43 (676) 571-0536
> > [log in to unmask]
> > [log in to unmask]
> > http://www.ruppweb.org/
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> >
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