Reply-To: | | [log in to unmask][log in to unmask], 2 Dec 2010 13:04:09 +00004633_ISO-8859-1 Put the attached files in /external/fieldtrip/private overwriting the files that are there. This should solve the problem.
Vladimir
On Thu, Dec 2, 2010 at 12:54 PM, Sid Kouider <[log in to unmask]> wrote:
> Ok I updated with the last version of SPM and tried the same procedure > but now there is another bug. I can upload the file for the fieldtrip > rejection function but now I can't use the option by Trial (it works only > for by Channels, and for the Summary). > > I get the message below: > > > > ??? Undefined function or method 'channelselection' for input arguments of > type 'cell'. > > > > Error in ==> rejectvisual_trial at 8 > > cfg.channel = channelselection(cfg.channel, data.label); > > > > Error in ==> ft_rejectvisual at 257 > > [chansel, trlsel, cfg] = rejectvisual_trial(cfg, tmpdata); > > > > Error in ==> spm_eeg_ft_artefact_visual at 71 > > data = ft_rejectvisual(cfg, data); > > > > Error in ==> spm_MEEGtools at 41 > > eval(fun); > > Error in ==> spm at 914 > > evalin('base',xTB(i).prog); > > > > ??? Error while evaluating uicontrol Callback > > > > Also, since it still works with channels, I tried to mark a channel as > bad, quit and when I reopen the channel is still marked as good. > > > > I use Matlab 2009b 64 bits on a windows 7 64bit machine. > > > > Thanks > > -Sid > > > > > > *De :* Vladimir Litvak [mailto:[log in to unmask]] > *Envoyé :* jeudi 2 décembre 2010 13:23 > *À :* [log in to unmask] > *Cc :* [log in to unmask] > *Objet :* Re: bug in SPM EEG fieldtrip visual artefact rejection > > > > Dear Sid, > > > > I tried the tool on your data and everything seems to work fine. Make sure > that you use the latest SPM update. > > > > Vladimir > > On Thu, Dec 2, 2010 at 10:34 AM, Sid Kouider <[log in to unmask]> > wrote: > > Dear Vladimir, > > We are analyzing EEG from infants with SPM8 and we would like to use the > fieldtrip visual artefact rejection tool. > > The way we do it is that we open the file through the function in MEEG > tools, we mark some of the trials as BAD, and then we click on quit assuming > that it will be saved automatically. > > The problems we encounter are the following: > > > > 1) When we open the file again with the same function (for instance to > examine further trials), the trials previously marked as bad before quitting > now appear as GOOD. > > When looking at the file, using > > > > tmp = > load('C:\Imaging\EEG\sublibaby_EEG\12mois\EEGdata\spm8dataFiles\bMrefspm8_Antoine.mat') > > tmp.D.trials(22).bad > > ans = > > > > 1 > > > > we do see that the trials marked as bad are indeed marked as bad. It looks > like the fieldtrip function is not considering that information when loading > the file, isn't it? > > > > 2) The second issue is more weird. The trials we update are marked as BAD > (at least in D.trials.bad), but not on all instances. Indeed, sometimes, > after reopening the file for instant a third time and marking further trials > as BAD, even the D.trials.bad is not updated. > > Any thought? Did you encounter the same problem? > > > > I have put one original file (i.e., without any trials marked as BAD) at > the following Yy0üt |