Hello,
If you are applying an existing transform with the -applyxrm option then refvol will be the template image whose space you are transforming into.
Many Regards
Matthew
> Hi Experts,
>
> I tried to convert the image segmented by FIRST from native sapce to template space. I tried to use the following command, but in the help file, I didn't find any examples. Does anyone know what does refvol refer to in this command? is it in the segmention result? I tried *_to_std_sub.nii but it didn't work.
> flirt [options] -in <inputvol> -ref <refvol> -applyxfm -init <matrix> -out <outputvol>
>
> Thanks
>
> Songling Liu
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