On 09/12/10 19:03, Rasmus Fogh wrote:
> Dear Justin,
>
> What happens when you try? Can you see anything that looks suspicious or
> different in the .scr or .par file?
>
> Yours,
>
> Rasmus
>
* Lucky me the original mail wasn'T delivered due to size limitations.
Here the smaller screenshot.
Hi Rasmu,
there are serveral things. Attached the raw files I get.
First of all I still get those "row" errors. Additionally I get:
Error converting 'False' to integer: set to 0.
If I try to swap the data I get
return self.func(*args)
File
"/usr/lib64/python2.6/site-packages/ccpn/python/ccpnmr/format/gui/ProcFilePopup.py",
line 172, in <lambda>
lambda : self.writeFile(self.azara,['processingPars'])],
File
"/usr/lib64/python2.6/site-packages/ccpn/python/ccpnmr/format/gui/ProcFilePopup.py",
line 278, in writeFile
self.updateAcqProcParsWidget()
File
"/usr/lib64/python2.6/site-packages/ccpn/python/ccpnmr/format/gui/AcqProcParsEditPopup.py",
line 1410, in updateFromWidget
getattr(self, parsListKey + 'Table').update()
File
"/usr/lib64/python2.6/site-packages/ccpn/python/memops/gui/ObjectsTable.py",
line 189, in update
self.callback()
File
"/usr/lib64/python2.6/site-packages/ccpn/python/ccpnmr/format/gui/AcqProcParsEditPopup.py",
line 1510, in parameterUpdate
swapApplData.value = swapState
File
"/usr/lib64/python2.6/site-packages/ccpn/python/memops/api/Implementation.py",
line 2165, in setValue
+ ": %s" % (self,)
ApiError: memops.Implementation.AppDataString.setValue:
cannot set value, frozen: <memops.Implementation.AppDataString
{application='allProcessing', keyword='swap', value='False'}>
I the processing files there are those things which make me wonder:
big_endian !Data is big endian
I might be wrong, but I doubt that I have big endian data. But I might
be from. Can I check that somehow?
varian 2 !Varian data
Makes azara scream with
Fatal error: in "/mnt/tmpfs/fid": can only process Varian data with
#traces = 1
Adding "swap" to the .par and removing the big_endian I get following
spectra (see attachment)
Perhaps someone knows what is going wrong.
Thanks justin
--
Justin Lecher
Institute of Structural Biology and Biophysics
ISB-3 Structural Biochemistry
Research Centre Juelich
52425 Juelich, Germany
phone: +49 2461 61 2117
ndim 2 !Number of dimensions
file /mnt/tmpfs/fid !Name of input FID
!big_endian !Data is big endian
swap
!varian 2 !Varian data
dim 1 !Dimension
npts 1794 !Number of real points
sw 14044.9438202 !Spectral width
sf 899.8646188 !Spectrometer frequence
refppm 4.77299999985 !Reference ppm
refpt 1026.0 !Reference point
nuc 1H !Nucleus
dim 2 !Dimension
npts 400 !Number of real points
sw 2800.0 !Spectral width
sf 91.1930195 !Spectrometer frequence
refppm 120.271140822 !Reference ppm
refpt 258.0 !Reference point
nuc 15N !Nucleus
input autoproc.par
output spectrum.ft
par spectrum.par
script_com 1
complex ! DataType
conjugate ! Varian
sinebell2 60 ! WindowFunction
zerofill 1 ! Zerofill
fft ! FourierTransform
phase 0.0 0.0 ! Phase
reduce ! Reduce
end_script
script_com 2
real
mask_ppmm ! NegateAlternate
complex ! DataType
conjugate ! Varian
sinebell2 60 ! WindowFunction
zerofill 1 ! Zerofill
fft ! FourierTransform
phase 0.0 0.0 ! Phase
reduce ! Reduce
end_script
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