Hello,
as to the WASP server: We found it to be very useful in the past, but the link is no longer functional!
Is there any other address for accessing this server?
Oliver
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PD Dr. Oliver H. Weiergräber
Institut für Strukturbiologie und Biophysik
ISB-3: Strukturbiochemie
Tel.: +49 2461 61-2028
Fax: +49 2461 61-1448
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From: CCP4 bulletin board [[log in to unmask]] On Behalf Of Robbie Joosten [[log in to unmask]]
Sent: Tuesday, December 21, 2010 9:55 AM
To: [log in to unmask]
Subject: Re: [ccp4bb] Mg2+ or water
You could also try the original WASP here (also for coloured Indo-dutch catholics): http://xray.bmc.uu.se/cgi-bin/gerard/rama_server.pl or you can use the latest WHAT_CHECK that also has an implementation of Nayal and Di Cera's algorithm.
Cheers,
Robbie
> Date: Mon, 20 Dec 2010 22:59:53 +0000
> From: [log in to unmask]
> Subject: Re: [ccp4bb] Mg2+ or water
> To: [log in to unmask]
>
> On 20/12/10 21:48, Robbie Joosten wrote:
> >
> >
> > Also note that Mg2+ is significantly smaller than water. It fits in
> > places where water cannot go. This doesn't look like a magnesium site
> > on first glance.
>
> I tend to agree with Robbie. I wonder what WASP would say... (if you
> use Coot, you can try the "Highly Coordinated Waters" validation test -
> a symmetry-enhanced implementation of the Nayal & Di Cera (1996) algorithm).
>
> Paul.
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52425 Juelich
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Vorsitzender des Aufsichtsrats: MinDirig Dr. Karl Eugen Huthmacher
Geschaeftsfuehrung: Prof. Dr. Achim Bachem (Vorsitzender),
Dr. Ulrich Krafft (stellv. Vorsitzender), Prof. Dr.-Ing. Harald Bolt,
Prof. Dr. Sebastian M. Schmidt
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