Hello All,
We have noted mis-registration) of the fusiform cortex to the cerebellum (approx 4-6mm ventral) in whole-brain functional images acquired at a std voxel size (3mm isotropic). It seems that this is taking place at the example_func2standard step; the example_func2highres image looks good. I have empirically tried FLIRT and FNIRT at various settings (warps of 5mm, 10mm, 20mm, 50mm) with the same result.
Has anyone else encountered this issue previously?
Very appreciative for any advice that can be provided.
Cheers,
Ted
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