Hi Natalia,
yes, you should use flirt with this spm_to_fsl.mat matrix:
1 0 0 12
0 1 0 14
0 0 1 22
0 0 0 1
so something like:
flirt -in spmT -ref mean_FA -out spmT_to_fsl -init spm_to_fsl.mat -applyisoxfm 1
Cheers,
Gwenaelle
--- En date de : Mar 30.11.10, Natalia Francisca <[log in to unmask]> a écrit :
> De: Natalia Francisca <[log in to unmask]>
> Objet: Re: [FSL] Overlay SPM t-map onto mean_FA_skeleton
> À: [log in to unmask]
> Date: Mardi 30 novembre 2010, 10h20
> Hi, they are both MNI_152 T1
> template, but SPM uses 2x2x2 while FSL uses 1x1x1.
> is it possible to resample the spm t-map (2x2x2mm) by FLIRT
> to 1x1x1mm though they have different FOVs ?
>
> Thanks in advance,
> Natalia.
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Gwenaëlle Douaud, PhD
FMRIB Centre, University of Oxford
John Radcliffe Hospital, Headington OX3 9DU Oxford UK
Tel: +44 (0) 1865 222 523 Fax: +44 (0) 1865 222 717
www.fmrib.ox.ac.uk/~douaud
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