Hi CCPNMR
I have gotten an error I don't know how to solve. I've done some calculations in Aria2, and all of a sudden I can't see my restraints & violations anymore. I tried validating my project and got the following error:
>>> Error loading file for: <ccp.nmr.NmrConstraint.NmrConstraintStore [5]>
Reading: <open file '/sbinlab2/rod/analysis/CR10_structure/ccp/nmr/NmrConstraint/5+CR10_structure_rod_2010-11-10-10-27-36-726_00001.xml', mode 'r' at 0x1f44d300>
Last xml tag read: NMRC.ViolationList.molStructures
Parser state was: reading
Current object was: <ccp.nmr.NmrConstraint.ViolationList [5, 1]>
Exception in Tkinter callback
Traceback (most recent call last):
File "/sbinlab2/software/x64/ccpnmr_2.1.5/python2.6/lib/python2.6/lib-tk/Tkinter.py", line 1410, in __call__
return self.func(*args)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/python2.6/lib/python2.6/lib-tk/Tkinter.py", line 495, in callit
func(*args)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/ccpnmr/analysis/popups/BrowseConstraints.py", line 760, in updateConstraintSets
len(constraintSet.constraintLists),
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/ccp/api/nmr/NmrConstraint.py", line 20177, in getConstraintLists
self.load()
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/api/Implementation.py", line 5030, in load
self.loadFrom(repositories[0])
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/api/Implementation.py", line 5064, in loadFrom
XmlIO.loadTopObject(repository.url.getDataLocation(), self)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/format/xml/XmlIO.py", line 236, in loadTopObject
return loadFromStream(open(filePath), topObjId=topObjId, topObject=topObject)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/format/xml/XmlIO.py", line 267, in loadFromStream
partialLoad=partialLoad)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/xml/Implementation.py", line 4857, in loadFromStream
+ ": %s:%s" % (curMap['content']['.qName'], vv[0])
ApiError: TopObject with package:gui not found or loaded: ccp.molecule.MolStructure:CR10_structure_rod_2010-11-10-10-27-33-861_00001
Error loading file for: <ccp.nmr.NmrConstraint.NmrConstraintStore [5]>
Reading: <open file '/sbinlab2/rod/analysis/CR10_structure/ccp/nmr/NmrConstraint/5+CR10_structure_rod_2010-11-10-10-27-36-726_00001.xml', mode 'r' at 0x1de0ae40>
Last xml tag read: NMRC.ViolationList.molStructures
Parser state was: reading
Current object was: <ccp.nmr.NmrConstraint.ViolationList [5, 1]>
Exception in Tkinter callback
Traceback (most recent call last):
File "/sbinlab2/software/x64/ccpnmr_2.1.5/python2.6/lib/python2.6/lib-tk/Tkinter.py", line 1410, in __call__
return self.func(*args)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/ccpnmr/analysis/AnalysisPopup.py", line 2253, in validateProject
self.project.checkAllValid(complete=complete)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/api/Implementation.py", line 6000, in checkAllValid
value.checkAllValid(complete)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/ccp/api/general/Method.py", line 10865, in checkAllValid
value.checkAllValid(complete)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/ccp/api/general/Method.py", line 1655, in checkAllValid
self.checkValid(complete)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/ccp/api/general/Method.py", line 1962, in checkValid
tobj.load()
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/api/Implementation.py", line 5030, in load
self.loadFrom(repositories[0])
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/api/Implementation.py", line 5064, in loadFrom
XmlIO.loadTopObject(repository.url.getDataLocation(), self)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/format/xml/XmlIO.py", line 236, in loadTopObject
return loadFromStream(open(filePath), topObjId=topObjId, topObject=topObject)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/format/xml/XmlIO.py", line 267, in loadFromStream
partialLoad=partialLoad)
File "/sbinlab2/software/x64/ccpnmr_2.1.5/ccpnmr2.1/python/memops/xml/Implementation.py", line 4857, in loadFromStream
+ ": %s:%s" % (curMap['content']['.qName'], vv[0])
ApiError: TopObject with package:gui not found or loaded: ccp.molecule.MolStructure:CR10_structure_rod_2010-11-10-10-27-33-861_00001
I've tried to copy my xml.bak file to .xml, however this still resolves in the same problem. Do I need to edit a file somewhere?
Kind regards
Robert Dagil
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