Hi Laura,
Thanks for this - we're looking in to it now, will update you soon. But just to quickly double check;
Have you applied all the latest CCPN Analysis updates (and then restarted analysis)? You can do this by selecting the 'Updates' button in the 'Project' menu.
If you're up to date, we must check that you're running the latest version of Analysis. The current stable version is 2.1.5 - you can tell which version you are running from looking at the text in the terminal.
If you still have problems then do let us know, but make sure that you let us know which version you're running!
Best, Dan
On 15 Nov 2010, at 19:17, Laura Anne Johnson wrote:
> To whom it may concern,
> I'm trying to use analysis to make assignments of an RNA that has nonstandard
> nucleotides. I see that CCPNMR has the three letter codes for the nucleotides I'd
> like to use, CFL, OMG, ADE, UMF, A2M, and T11, but when I click on the molecule
> in the "small compounds" tab in the Molecule window, I get a message that says
> "Chemical component not available locally. OK to download to local database?"
> When I click "yes" I get the message "No atom coordinates are available for
> chemical compound OMG" for instance. I've tried looking up OMG on EBI's website
> but don't know what file I should download and to where I should save it or how to
> import it into CCPNMR. I'd appreciate some advice.
> Thank you,
> Laura J.
Daniel O'Donovan
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