Dear FSL Experts,
I have a similar problem where I cannot find GM_mod_merg files after fslvbm3.
I couldn't find anything in the fslvbm*.e* files. but for fslvbm*.o*, I found these:
Setting subsampling
Setting reg mode
Setting lambda
Warning, Jacobian not within prescribed range.
My list of files for each of the subjects is:
Patient1_struc.nii
Patient1_struc_brain.nii.gz
Patient1_struc_brain_mixeltype.nii.gz
Patient1_struc_brain_pve_0.nii.gz
Patient1_struc_brain_pve_2.nii.gz
Patient1_struc_brain_pveseg.nii.gz
Patient1_struc_brain_seg.nii.gz
Patient1_struc_cut.nii.gz
Patient1_struc_GM.nii.gz
Patient1_struc_GM_to_T.mat
Patient1_struc_GM_to_T.nii.gz
Patient1_struc_GM_to_T_init.mat
Patient1_struc_GM_to_T_init.nii.gz
Patient1_struc_GM_to_T_init_warp.msf
Patient1_struc_GM_to_T_init_warp.nii.gz
Patient1_struc_GM_to_template_GM.log
Patient1_struc_GM_to_template_GM.mat
Patient1_struc_GM_to_template_GM.nii.gz
Patient1_struc_GM_to_template_GM_init.log
Patient1_struc_GM_to_template_GM_mod.nii.gz
Patient1_struc_GM_to_template_GM_warp.msf
Patient1_struc_GM_to_template_GM_warp.nii.gz
Patient1_struc_JAC_nl.nii.gz
Would appreciate your help.
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