I am not sure that I understand your question perfectly... You can add/remove waters "automatically" during refinement using the proper options. After refinement, then
you can also (i.e. you should also) take the output mtz file and use a graphics program (with PDB and MTW file) for modelling (including addition/deletion of waters).
Several programsavailable, the one I use nowadays is Coot. But perhaps this is not the question you are asking...
Fred.
> Message du 16/10/10 16:29
> De : "Hussain Bhukyagps"
> A : [log in to unmask]
> Copie à :
> Objet : [ccp4bb] How to add water molecules..??
>
> Dear All,
>
> How to add water molecules in the structure (PDB) after all the refinements..??
>
> Thank You,
> Hussey.
>
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