Gwenaelle, I'm afraid the post I sent about a week ago may have been buried under the more recent postings. Your assistance would be greatly appreciated.
If I am incorporating volume differences between two populations (control and dementia) would I only be interested in the GM segmentation images (i.e. pat_9400_struc_GM and then smooth) and not the rest of them (i.e pat_9400_struc_GM_to_template_GM_mod)?
My next question...
**_struc_GM_to_template --> is this the GM segmentation then registration to the ICBN152 template or the study specific template?
If this is the study specific template, would this not alter the transformation I am going to have to make in AFNI, since my functional data is in talaraich space?
Many thanks,
Karim
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