Hi Dr. Beckmann,
I have been trying to run the dual regression script using fsl 4.1.5
by typing the command below:
dual_regression /data/vapsych4/fMRI/.gica/groupmelodic.ica/melodic_IC
1 /data/vapsych5/fMRI/glmdesign/Design.mat
/data/vapsych5/fMRI/glmdesign/Design.con 1 grot_test \'cat
/data/vapsych4/fMRI/.gica/.filelist\'
I get the messages below:
creating common mask
doing the dual regressions
sorting maps and running randomise
However, when I look at my output, I don't get any images but see the
below files in the 'scripts+logs' directory:
:
command drD.e29754.15 drD.e29754.34 drD.o29754.13 drD.o29754.32
drA drD.e29754.16 drD.e29754.35 drD.o29754.14 drD.o29754.33
drA.e29110.1 drD.e29754.17 drD.e29754.36 drD.o29754.15 drD.o29754.34
drA.e29110.2 drD.e29754.18 drD.e29754.37 drD.o29754.16 drD.o29754.35
drA.o29110.1 drD.e29754.19 drD.e29754.38 drD.o29754.17 drD.o29754.36
drA.o29110.2 drD.e29754.2 drD.e29754.39 drD.o29754.18 drD.o29754.37
drB drD.e29754.20 drD.e29754.4 drD.o29754.19 drD.o29754.38
drB.e29134 drD.e29754.21 drD.e29754.40 drD.o29754.2 drD.o29754.39
drB.o29134 drD.e29754.22 drD.e29754.41 drD.o29754.20 drD.o29754.4
drC drD.e29754.23 drD.e29754.42 drD.o29754.21 drD.o29754.40
drC.e29233.1 drD.e29754.24 drD.e29754.43 drD.o29754.22 drD.o29754.41
drC.e29233.2 drD.e29754.25 drD.e29754.44 drD.o29754.23 drD.o29754.42
drC.o29233.1 drD.e29754.26 drD.e29754.5 drD.o29754.24 drD.o29754.43
drC.o29233.2 drD.e29754.27 drD.e29754.6 drD.o29754.25 drD.o29754.44
drD drD.e29754.28 drD.e29754.7 drD.o29754.26 drD.o29754.5
drD.e29754.1 drD.e29754.29 drD.e29754.8 drD.o29754.27 drD.o29754.6
drD.e29754.10 drD.e29754.3 drD.e29754.9 drD.o29754.28 drD.o29754.7
drD.e29754.11 drD.e29754.30 drD.o29754.1 drD.o29754.29 drD.o29754.8
drD.e29754.12 drD.e29754.31 drD.o29754.10 drD.o29754.3 drD.o29754.9
drD.e29754.13 drD.e29754.32 drD.o29754.11 drD.o29754.30
drD.e29754.14 drD.e29754.33 drD.o29754.12 drD.o29754.31
I do not get any error messages either but at the same time I also
don't get any brain activation maps from my resting-state fMRI data
Please let me know if you have any idea as to what might have gone
wrong here.
Thank you!
Cheers,
-Karuna
Karuna Subra
Postdoc
UCSF
San Francisco
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