Hi Moran -
On 8 July 2010 17:26, Moran Artzi <[log in to unmask]> wrote:
> Hi,
> I have a 2 scripting questions:
> 1. After checking my results using fslview (as >> fslview image1.nii.gz -l Blue image2.nii.gz -l Cool)
> How can I save (as a picture) the presented images using the command line?
I'm not sure there is any way to do this in the context of scripting.
You might try using fsl's overlay command to generate the image you
want..
> 2. When saving a text file for a calculate values
> as >> fslstats cluster1.nii.gz -V -M -R>>clustersvol.txt
> >> fslstats cluster2.nii.gz -V -M-R >>clustersvol.txt
> >> fslstats cluster3.nii.gz -V -M-R >>clustersvol.txt
> How can I add using the command line (to the output text file) titles differentiates between the calculated values?
>
Perhaps:
echo -n "Title " >> clustersvol.txt ; fslstats cluster1.nii.gz -V -M
-R>>clustersvol.txt
Cheers,
Eugene
> Many thanks
> Moran
>
>
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