Hi Philipp,
it sounds like the all.bvars file has not been created correctly. Did you
get an error message when running concat_bvars? I would run the previous
steps again, as concat_bvars may generate an empty file even when it has
failed.
Hope that helps,
Stam
----- Original Message -----
From: "Philipp Thomann" <[log in to unmask]>
To: <[log in to unmask]>
Sent: Sunday, June 06, 2010 11:40 AM
Subject: [FSL] FSL FIRST Structural Analysis Practical
Dear All, I just attended the FSL+FS course in Heidelberg which was really
excellent!
I've downloaded the FSL software and the tutorial data sets for Mac (I'm
having a MacBook Pro Mac OS X Version 10.6.3) and I am running through some
practicals again. I followed the FIRST instructions step by step and met a
problem during the vertex analysis after entering the command
first_utils --usebvars --vertexAnalysis -i all.bvars -o
diff_con0_dis1_L_Hipp_mni -d design_con0_dis1.mat --useReconMNI
the bash simply says:
Cannot open file.
Cannot open file.
I already checked that the all.bvars file has been successfully created in
the previous step.
Any Ideas?
Thanks Philipp
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