Hi,
Most of the command line is unchanged from the non-voxelwise version:
e.g.
randomise -i normalInputFile -o outputName -m mask -d design.mat -t design.con -n 500 --vxf=voxelwiseRegressor --vxl=<whichever regressor it replaces in design.mat>
Many Regards
Matthew
> Hello Matthew,
>
> Thank you very much for replying. I think I have understood the idea in general but just want to make sure that my understanding is inline with the correct methodology.
>
> This may sound dumb but what is the correct way of doing this...
>
> e.g.
>
> randomise -i ALL_FLAIR -o tbss_FLAIR -m mean_FA_skeleton_mask -d design.mat -t design.con -n 500 --vxf
>
> will feed in 4d FLAIR (each time pt corresponding to a subject) but there is no FA information except for the skeleton which is going in.
>
> So how do I feed in both FLAIR and FA images and run the stats ? Or is the above randomise command good to deal with applying voxelwise corrections to FA even if I dont feed in any FA images.
>
>
>
> kindly advise
>
> Thank you
> Sincerely,
> Ankit Master
>
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