The joys of binary releases. I think your libstdc++ must be older than
the one we used to compile the code with. So we used libstdc++.so.6.0.10
and I wouldn't be surprised if you have 6.0.9 or something. (Look in
/usr/lib64, if you have a /usr/lib64, otherwise look in /usr/lib.) If you
can't get 6.0.10 installed then I've put a copy of ours at:
http://www.ccpn.ac.uk/download/extendNmr/libstdc++.so.6.0.10
(You might want to wget that rather than trying to get it via a browser.)
Put this in extendNmr/other/system/lib/. I hope your OS will be clever
enough to pick that up. But I wouldn't be surprised if there are other
dependencies which will then show up.
Wayne
On Thu, 17 Jun 2010, Vitaliy wrote:
> Hello:
> I am getting this error while running aria from extendNmr:
> WARNING [Protocol]: Traceback (most recent call last):
> File "/scratch/ccpn/extendNmr/extend_nmr/aria/src/py/aria/
> Protocol.py", line 1313, in dumpIteration
> File "/scratch/ccpn/extendNmr/extend_nmr/aria/src/py/aria/
> Protocol.py", line 1241, in _dump_rms
> File "/scratch/ccpn/extendNmr/extend_nmr/aria/src/py/aria/
> RmsReport.py", line 379, in go
> File "/scratch/ccpn/extendNmr/extend_nmr/aria/src/py/aria/
> RmsReport.py", line 308, in plotPsReport
> File "/scratch/ccpn/extendNmr/other/python2.5/lib/
> python2.5/site-packages/matplotlib/pylab.py", line 206, in
> <module>
> File "/scratch/ccpn/extendNmr/other/python2.5/lib/
> python2.5/site-packages/matplotlib/mpl.py", line 1, in
> <module>
> File "/scratch/ccpn/extendNmr/other/python2.5/lib/
> python2.5/site-packages/matplotlib/artist.py", line 5, in
> <module>
> File "/scratch/ccpn/extendNmr/other/python2.5/lib/
> python2.5/site-packages/matplotlib/transforms.py", line 34,
> in <module>
> ImportError: /usr/lib64/libstdc++.so.6: version `GLIBCXX_3.4
> .9' not found (required by /usr/local/extendNmr/other/
> python2.5/lib/python2.5/site-packages/matplotlib/_path.so)
>
> Could please advise on how to fix it.
> Thank you,
> Vitaliy
>
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