Hi Gwanelle,
I ran fslvbm again, and ran into more problems.\
the fslvbm 2c file says:
WARNING - study-specific template will be created from ALL input data - may not be group-size matched!!!
WARNING:: Flipping Left/Right orientation (as det < 0)
and the fslvbm2d.e* file says:
fnirt::fnirt_clp: --ref=template_GM_init and --refmask=/storage/fsl415/fsl/data/standard/MNI152_T1_2mm_brain_mask_dil have different dimensions.
** ERROR (nifti_image_read): failed to find header file for 'c001_struc_GM_to_T_init_warp'
** ERROR: nifti_image_open(c001_struc_GM_to_T_init_warp): bad header info
Error: failed to open file c001_struc_GM_to_T_init_warp
ERROR: Could not open image c001_struc_GM_to_T_init_warp
Image Exception : #22 :: Failed to read volume c001_struc_GM_to_T_init_warp
An error occured while reading file: c001_struc_GM_to_T_init_warp
** ERROR (nifti_image_read): failed to find header file for 'c001_struc_GM_to_T_init_warp'
** ERROR: nifti_image_open(c001_struc_GM_to_T_init_warp): bad header info
Error: failed to open file c001_struc_GM_to_T_init_warp
Cannot open volume c001_struc_GM_to_T_init_warp for reading!
** ERROR (nifti_image_read): failed to find header file for 'c001_struc_GM_to_T_init_tmp'
** ERROR: nifti_image_open(c001_struc_GM_to_T_init_tmp): bad header info
Error: failed to open file c001_struc_GM_to_T_init_tmp
ERROR: Could not open image c001_struc_GM_to_T_init_tmp
Image Exception : #22 :: Failed to read volume c001_struc_GM_to_T_init_tmp
Any ideas?
Thanks!
Massih
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