Hi,
It looks like the specified input file GM_mod_merg_s2.nii.gz is either damaged or non-existent ( are you running randomise in the correct directory? )
Many Regards
Matthew
> Hi,
>
> I've been working with Kate to modify the VBM code and template files for use with monkeys and she recommended posting to the list.
>
> Generally, it seems that when I run the modified fslvbm_2_template -n and fslvbm_3_proc the proper files are created.
>
> However, the subject template includes all subjects, not just the ones in my template_list file.
>
> Also, I receive the following error when I run randomise:
>
> $ randomise -i GM_mod_merg_s2 -m GM_mask -o fslvbm -d design.mat -t design.con -c 2.3 -n 5000 -V
> randomise options: -i GM_mod_merg_s2 -m GM_mask -o fslvbm -d design.mat -t design.con -c 2.3 -n 5000 -V
> ** ERROR (nifti_image_read): failed to find header file for 'GM_mod_merg_s2'
> ** ERROR: nifti_image_open(GM_mod_merg_s2): bad header info
> Error: failed to open file GM_mod_merg_s2
> Loading Data: ERROR: Could not open image GM_mod_merg_s2
> ERROR: Program failed
>
> Note: I receive the same error when I use the GM_mod_merg_s3 file instead.
>
> Any suggestions as to what might be wrong and how to fix it would be appreciated. Please let me know what additional information you may need.
>
> Thanks,
>
> Jul Lea
>
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