Reply-To: | | [log in to unmask][log in to unmask]> wrote: >>> Dear Ged, >>> >>> thank you very much. It was easy... >>> By the way, as far as I understand, the colorbar displayed is the one with >>> the T values, right? Is it possibe to show a colorbar with p-values instead? >>> >>> Thanks. >>> >>> Regards, >>> >>> Joćo >>> >>> On Thu, May 6, 2010 at 11:42 AM, DRC SPM <[log in to unmask]> wrote: >>>> Dear Joćo, >>>> >>>> When you've got the glass brain results up in SPM, click the "save" >>>> button near the bottom right of the interactive window, and enter a >>>> filename for the output image. You should then be able to load this >>>> thresholded t-map as an overlay in MRIcroN etc. >>>> >>>> Note that you can display the blobs overlaid on an image in SPM itself >>>> too, just click the "overlays..." menu, and pick "sections" and then >>>> select an image you want to overlay onto (e.g. an average image, >>>> created by warping your original images with the same transformations >>>> used to create your VBM data, and then using imcalc with expression >>>> mean(X) and the data matrix (dmtx) flag true). If you've used DARTEL, >>>> the simplest thing to overlay onto is the GM of the final template, >>>> e.g. Template_6.nii. >>>> >>>> Hope that helps, >>>> Ged >>>> >>>> 2010/5/6 Joćo Duarte <[log in to unmask]>: >>>>> Dear SPMers, >>>>> >>>>> how can I display the map of significant blobs that is output of VBM >>>>> analysis in SPM8, using for example MRIcroN? >>>>> >>>>> Thanks in advance. >>>>> >>>>> Regards, >>>>> >>>>> Joćo >>>>> >>> >> >> > > > -- > Guillaume Flandin, PhD > Wellcome Trust Centre for Neuroimaging > University College London > 12 Queen Square > London WC1N 3BG >[log in to unmask] |