Thanks for the pointer, Xue Feng!
OK, now I see the following line in *.fsf which I guess is for outlier inference:
set fmri(robust_yn) 1
Do I still need to include --io or --inferoutliers in the command line of flameo?
Gang
On Apr 6, 2010, at 9:32 AM, Xue, Feng wrote:
> Please check your design.fsf
>
> On Mon, Apr 5, 2010 at 10:58 PM, Gang Chen <[log in to unmask]> wrote:
>> I'm trying to run a group analysis in flameo with flame1+2. To generate the setup files for flameo, I turn on the button for "Use automatic outlier de-
>> weighting" on the FSL GUI interface, but it seems the *.mat, *.con, and *.grp files saved from the GUI don't really change compared to the ones
>> when the button is turned off. So if I want to infer outliers, does the button work with flameo? Or is the option --io, not the button on the GUI, the correct way to go with flameo?
>>
>> Thanks,
>> Gang
>
>
>
> --
> Best Regards
>
> Xue, Feng Phd. candidate
> Major in Developmental Cognitive Neuroscience
>
> National Key Laboratory of Cognitive Neuroscience and Learning
> Beijing Normal University
> Beijing, China. 100875
> Tel: +86-13810154455
> web: http://psychbrain.bnu.edu.cn
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