Do you just want the FA in the mask, or in some specific tract?
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of E.Tinelli
Sent: Wednesday, April 21, 2010 4:56 PM
To: [log in to unmask]
Subject: [FSL] FA value and mask
Dear users,
I followed the FDT process pipeline, now i want calculate FA value of white
matter into superior frontal right lobe.
So, i 'registered diffusion space into T1MNI 2mm, now i created with fslview
mask of superior frontal; can i use this mask as ROI in probtrack using
single mask and after fslstats it`s correct?
Thanks
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