HI ALL
After some investigation I found the following output when I attempted to
run fslvbm_2_template. One row of te slicesdir image from original T1
weighted images is attached, all rows look similiar
Whats wrong? I used fslchfiletype to convert img/hdr to nifti_gz
using fslchfiletype NIFTI_GZ <filename>
Please help!!
Thanks in advance
Lena
Console log:
____________________________
lkphome:~ lkphome$ /Users/lkphome/Desktop/fslvbm2a ; exit;
** ERROR (nifti_image_read): failed to find header file for
'CON_SS_01_struc_brain'
** ERROR: nifti_image_open(CON_SS_01_struc_brain): bad header info
Error: failed to open file CON_SS_01_struc_brain
ERROR: Could not open image CON_SS_01_struc_brain
Image Exception : #22 :: Failed to read volume CON_SS_01_struc_brain
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
/Users/lkphome/Desktop/fslvbm2a: line 1: 5449 Abort trap
/Users/lkphome/imaging/fsl/bin/fast -R 0.3 -H 0.1 CON_SS_01_struc_brain
** ERROR (nifti_image_read): failed to find header file for
'CON_SS_03_struc_brain'
** ERROR: nifti_image_open(CON_SS_03_struc_brain): bad header info
Error: failed to open file CON_SS_03_struc_brain
ERROR: Could not open image CON_SS_03_struc_brain
Image Exception : #22 :: Failed to read volume CON_SS_03_struc_brain
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
/Users/lkphome/Desktop/fslvbm2a: line 2: 5499 Abort trap
/Users/lkphome/imaging/fsl/bin/fast -R 0.3 -H 0.1 CON_SS_03_struc_brain
** ERROR (nifti_image_read): failed to find header file for
'CON_SS_07_struc_brain'
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