Hi Stephen,
Thanks for your answer. When I run film_gls on my data, it says
"An exception has been thrown
Paradigm filename needs to be specified."
Can I turn off this requirement and just run temporal whitening on the raw data?
If this requirement can not be turned off, since my data is resting
state, what design matrix should I use?
Best,
Leo
On Mon, Feb 15, 2010 at 1:17 AM, Stephen Smith <[log in to unmask]> wrote:
> Hi - flm_gls can output the whitened data with the -output_pwdata flag - you
> would want to apply this to the filtered_func_data created by FEAT.
> Cheers.
>
>
>
> On 11 Feb 2010, at 19:40, Yiou Li wrote:
>
> Hi all,
>
> I am wondering if there is a handy command in fsl to perform temporal
> whitening on fMRI data (to remove the temporal autocorrelation)? It
> seems FEAT should have such feature but I can't find it explicitly
> either from the FEAT GUI menu or FEAT command help.
>
> Comment is really appreciated!
>
> Leo
>
>
>
> ---------------------------------------------------------------------------
> Stephen M. Smith, Professor of Biomedical Engineering
> Associate Director, Oxford University FMRIB Centre
>
> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
> +44 (0) 1865 222726 (fax 222717)
> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
> ---------------------------------------------------------------------------
>
>
>
>
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