Dear Matthew,
Thank you very much for your kind help.
I tried to download the binaries from folders fdt_412, fdt_414, but I
realized that I could not download the whole folder by Firefox,
Konqueror, or command wget.
I was able to copy files one by one in each folder directory except
for the folder doc/.
Would you show me how to download all of them?
Also after successfully downloading files, can I just put them into
the folder, such as into /usr/local/bin, or should I compile the files
(there are e.g. streamlines.cc, streamlines.h, streamlines.c; and
those files were not in the fsl/bin in Mac fsl v4.1.2)? I am a
beginner of Linux system..
I would appreciate your kind help in advance.
Riki
--------------------
Riki Matsumoto M.D., Ph.D.
Department of Neurology
Kyoto University Graduate School of Medicine
Shogoin, Sakyo, Kyoto, JAPAN 606-8507
--------------------
On 2010/01/29, at 20:24, Matthew Webster wrote:
> Hi,
> I've put the 4.1.2 and 4.1.4 fdt/bedpostx binaries in:
>
> http://www.fmrib.ox.ac.uk/fsldownloads/patches/
>
> Many Regards
>
> Matthew
>
>> Dear Saad and lists,
>>
>> We would like to use the older versions for the diffusion study
>> which is currently under analyses.
>> (until 4.1.2 the termination mask had a different definition; 4.1.4
>> and 4.1.5 had different calculation in bedpostx for higher b value)
>> We have just got a new linux machine and I wonder if we could
>> download the older versions (4.1.2, 4.1.4 CentOSv5.4 64bit) so that
>> we could switch using the different versions by just changing the
>> setup files (e.g. bashrc; folder names fslv412, fslv414, fslv415).
>> I would appreciate if you could tell me where to get these old
>> versions. I went to http://fsl.fmrib.ox.ac.uk/fsldownloads/oldversions/
>> , but I could not find fsl-4.1xxx.tar.gz.
>>
>> Many thanks in advance.
>>
>> Riki
>> --------------------
>> Riki Matsumoto M.D., Ph.D.
>> Department of Neurology
>> Kyoto University Graduate School of Medicine
>> Shogoin, Sakyo, Kyoto, JAPAN 606-8507
>> Tel: +81-(0)75-751-3772
>> Fax:+81-(0)75-751-9416 (for large transfer, use +81-(0)75-761-9780)
>> --------------------
>>
>>
>>
>> On 2010/01/24, at 21:47, Saad Jbabdi wrote:
>>
>>> Hi
>>> Yes, everything is compatible.
>>> There might be slight differences in the distributions calculated
>>> by bedpostx - these differences will be higher with noisier data
>>> (higher b-value, smaller voxels, etc.) - so to be safe, I wouldn't
>>> mix both versions of bedpostx to study the same group of subjects.
>>>
>>> Saad.
>>>
>>>
>>>
>>> On 24 Jan 2010, at 08:20, Jiří Keller, M.D. wrote:
>>>
>>>> Hello,
>>>> just to be sure - are the results backward-compatible ? As it was
>>>> not
>>>> in one of the older upgrades and bedpostx needed to be run again. I
>>>> just need to be on the safe side with my older data ... It seems
>>>> to be
>>>> OK from what I hear, but can someone from FMRIB confirm it ?
>>>> George
>>>>
>>>> 2010/1/22 Matthew Webster <[log in to unmask]>:
>>>>> Hi,
>>>>> The 4.1.5 patch has been released:
>>>>>
>>>>> This is mainly a collections of minor improvements and bug-
>>>>> fixes, including:
>>>>> An issue with Randomise "pausing" has been fixed.
>>>>> The Posterior Insula has been added to the Juelich cyto-
>>>>> architectonic atlas,
>>>>> courtesy of Simon Eickhoff.
>>>>> There are some improvements to the bedpostx monitor script.
>>>>> Large speedup for invwarp by automatically adjusting the useful
>>>>> FOV
>>>>> internally (no cropping of the original images needed).
>>>>>
>>>>> The full distribution can be downloaded from
>>>>> http://www.fmrib.ox.ac.uk/fsldownloads/
>>>>> while incremental patches from 4.1.4 and 4.1.x can be downloaded
>>>>> from
>>>>> http://www.fmrib.ox.ac.uk/fsldownloads/patches
>>>>>
>>>>>
>>>>>
>>>>
>>>
>>> --
>>> Saad Jbabdi
>>> University of Oxford, FMRIB Centre
>>>
>>> JR Hospital, Headington, OX3 9DU, UK
>>> (+44)1865-222466 (fax 717)
>>> www.fmrib.ox.ac.uk/~saad
>>
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