For fslview you need to install the expat-compat library. Your bet is
actually working, it's just that you asked it to write output to a
directory you don't have permission to write to. Change output path
and all should be well.
Dave Flitney, IT Manager
University of Oxford, FMRIB Centre
JR Hospital, Oxford OX3 9DU
T: 01865 222713 F: 01865 222717
On 31 Dec 2009, at 19:17, Mohan Pauliah <[log in to unmask]> wrote:
> Dear FSLers,
> I am trying to install fsl-4.1.4-centos4_32.tar.gz on Linux SUSE11.1
> KDE ver 4.
> But running BET or FSL view doesnot work well.
>
> Error messages are below
> medstud@linux-5o0s:/usr/local/DATA_DCE/DuvalC/121809/s26965> fsl
> /usr/local/fsl/bin/fslview_bin: error while loading shared
> libraries: libexpat.so.0: cannot open shared object file: No such
> file or directory
> /usr/local/fsl/bin/bet /usr/local/fsl/data/standard/MNI152_T1_1mm /
> usr/local/fsl/data/standard/QQQQ -f 0.5 -g 0
> Error: failed to open file /usr/local/fsl/data/standard/QQQQ.nii.gz
> ERROR: Could not open image /usr/local/fsl/data/standard/QQQQ
> Image Exception : #23 :: Failed to open volume /usr/local/fsl/data/
> standard/QQQQ for writing
> terminate called after throwing an instance of
> 'RBD_COMMON::BaseException'
> /usr/local/fsl/bin/bet: line 380: 7657 Aborted $
> {FSLDIR}/bin/bet2 $IN $OUT $bet2opts
> Finished
> /usr/local/fsl/bin/bet /usr/local/fsl/data/standard/MNI152_T1_1mm /
> usr/local/fsl/data/standard/MNI152_T1_1mm_brain -f 0.5 -g 0
> Error: failed to open file /usr/local/fsl/data/standard/
> MNI152_T1_1mm_brain.nii.gz
> ERROR: Could not open image /usr/local/fsl/data/standard/
> MNI152_T1_1mm_brain
> Image Exception : #23 :: Failed to open volume /usr/local/fsl/data/
> standard/MNI152_T1_1mm_brain for writing
> terminate called after throwing an instance of
> 'RBD_COMMON::BaseException'
> /usr/local/fsl/bin/bet: line 380: 7853 Aborted $
> {FSLDIR}/bin/bet2 $IN $OUT $bet2opts
> Finished
>
> Any guidance to solve this problem.
>
> Thanks
>
> --
> Paul
>
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