Le 14 janv. 2010 à 17:39, Paul Emsley a écrit :
> Miguel Ortiz Lombardia wrote:
>> Dear all,
>>
>> Is there a way to ask Coot to write pdb coordinate files with nucleic acid residue names in 'standard' PDB format? That is: DA, DC, DG, DT, A, C, G, T...
>>
>
> No. It's on the list. I will use the PDB-approved nomenclature.
>
Right, thanks Paul.
For the time being, I'm using this sed command (for DNA):
sed -e 's/ \(.\)d \(.\)/ D\1 \2/' file.pdb > edited_file.pdb
Best,
-- Miguel
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