We are pleased to announce the release of Coot-0.6.1
Source code:
http://www.biop.ox.ac.uk/coot/software/source/releases/coot-0.6.1.tar.gz
Binaries
http://www.biop.ox.ac.uk/coot/software/binaries/releases/
(the building on additional platforms is underway):
Paul
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Release 0.6.1
o FEATURE: Quick-save - bound to Ctrl-S.
o FEATURE: Binary updates (pre-releases) now available.
o FEATURE: tutorial data can be loaded from a Extensions menu item
o FEATURE: A means to set the refinement weight so that the
resulting chi squareds are 1.0 (or close) [Katya Heldwein]
o CHANGE: "Save dialog positions" now also saves the Edit Chi Angles
dialog position [Markus Rudolph].
o CHANGE: Coot can now go through proxies (http_proxy environment
variable) to get News.
o CHANGE: Baton manipulation is now possible when the skeleton runs
out.
o CHANGE: Hydrogen representation now thin and grey monotone.
o CHANGE: Interface to sidechain docking improved [Phil Evans].
o CHANGE: Updates to sync with new EDS (Electron Density Server).
o CHANGE: Filenames of mtzs and pdb in the current directory are now
stored as relative in the state file [Andre White].
o CHANGE: Default image type for screenshot is now PNG [Joel Bard].
o CHANGE: --python --no-graphics results in a python prompt at the
command line [Gabor Bunkoczi].
o BUG-FIX: Check waters by difference map now works again [Misty X].
o BUG-FIX: SSM alignment crash fixed [Ed Pozharski].
o BUG-FIX: Splitting a sidechain with zero occupancy no longer
leaves atoms with negative occupancy [Takaaki Fukami].
o BUG-FIX: Shift-spacing through waters, deleting active water now
goes to previous atom [Ingo Korndoerfer].
o BUG-FIX: No torsion restraints added when the esd of the torsion
is 0 (Phenix compatibility) [Joel Bard].
o BUG-FIX: Rotamers and Edit Chi now works for MSEs [Clemens Vonrhein].
o BUG-FIX: Hydrogen environment distances now are synchronised with
the display of hydrogens [JED].
o BUG-FIX: Phosphate-backbone mode enabled for symmetry [Miguel
Ortiz Lombardia].
o BUG-FIX: Carbon-Iodine bond length limit lengthened.
o BUG-FIX: Go To Atom dialog is updated after simple mutation of a
base [Miguel Ortiz Lombardia]
o BUG-FIX: Coot no longer things that a SHELXL BLOC card is an atom
[Zbigniew Dauter].
o BUG-FIX: sugar chains now find the linkage type better (rather
than forcing seemingly-random chain breaks) [JED].
o BUG-FIX: Go to Atom keyboarding chain-id superfluous functions
removed [JED].
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