Hi Eelco,
can you tar up the scripts+logs directory and send this to me together with your local version of the script (need to email off the list as the attachment will be removed otherwise).
cheers
Christian
On 22 Jan 2010, at 09:45, Eelco van Dongen wrote:
> Sorry for the spamming....Please ignore this last msg, the original masks
> are fine, just the contrast setting in my viewer needed to be changed :)
>
> E.
>
> On Fri, 22 Jan 2010 09:29:34 +0000, Eelco van Dongen
> <[log in to unmask]> wrote:
>
>> Update:
>>
>> I found that the masks are not generated properly because of the -odt char
>> call. This results in empty masks, therefore no brain signals are taken into
>> the analysis. Removing this last part produces proper brain masks. However,
>> subsequently the rest of the analysis still doesn't produce any results and
>> no regression files (stage1, stage2) are generated.
>>
>> best,
>> Eelco
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