Hi,
Apparently you use the home directory for your data. In such a case you
should ensure that both computer use the same global home directory
(that might be hardlinked to the local one) and have the same writing
permissions. For this purpose I use NIS. It also might be a good idea to
set up a global directory for fsl and related software, so that you do
not have several copies of it.
Good luck anyway,
wolf
On 12/10/2009 12:36 PM, Andrew Janke wrote:
>> I set up SGE on two machines, namely A and B, each have 8 CPUs with platform
>> CentOS 5 (AMD64). I set A as the qmaster, also as execd, and I set B as
>> execd, too. The setup was done according to the guide on your website
>> (ajanke), which goes well. After set up, I tried a test task
>> (/sge/examples/simple.sh), which goes well, too.
>>
>> Then, I tried to run bedpostx for one sigle subject data. The data is
>> uploaed to A, and submit. The job was distributed to the 8 CPUs of A
>> immediately, however, when it is distributed to B, the job went Error. The
>> message showed that: can't chdir to /home/<mydata>,
>>
> Have you set up B such that it NFS mounts user directories from A?
> You should be able to log into either machine and see exactly the same
> files.
>
>
> Andrew
>
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